Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847597.1_cds_XP_016510116.1_22990
CDS Infomation

[gene=LOC107827486] [db_xref=GeneID:107827486] [protein=uncharacterized protein LOC107827486] [protein_id=XP_016510116.1] [location=join(61410..61621,63569..63690,63777..63865,63953..63988,64171..64264,64883..64925,65013..65113,65377..65441,65565..66058,66153..66240,66329..66439,66776..67344,67985..68120,68210..68278,68390..68521,69037..69150)] [gbkey=CDS]
Sequence

ATGGAACAGAAGCACGTATTGTTATCGGCATTGAGTGTAGGGGTTGGAGTAGGGCTTGGA
TTGGCGTCAGGACAGGCTGTTAATAAATGGACCGGTGGTAATTCGGCGGCGGAAGGGATA
ACGGCCGACCAAATCGAGCAGGAACTTCGACGCCTCTTCGTTGACGGCAAGCATACCAAA
GTCTCCTTTGCTGACTTCCCTTATTTTCTCAGTGAACGGACGCGCGTGTTATTAACAAGT
GCAGCATACGTTCATCTGAATCACTTAGATGTGTCTAAACATACAAGAAATCTTTCTCCT
GCAAGCAGGGCCATACTGCTTTCAGGGCCTGCTGAACTTTACCAGCAAACTCTAGCGAAG
GCTTTGGCGCATCATTTTGATGCTAAGCTGCTGCTTTTGGATCTAACTGACTTCACTCTA
AAGATGCAGAGCAAGTATGGAATCTTCAAGAAAGAATCGGCTTTCAAGAGGTCAACCTCA
GAGTCTATGTTGGGACGTTGGTCCAGTTTGATTGGTTCATTCTCAATTCTTCCAGCAAGA
GAGAATAATGGAGGTACCTTTTCAAGGCAAACCACTGCGTTTGATGCCAAATCAAGGAAT
AGGGAAGGTGCAAGCAACTCTCTAAAGCATCGCAGGACAGCCTCTGTTTCTTCTGATATA
AGTAGCATCAGCTCTGACTCCTGTTCTTCAAATCCAGCTCCAACCAAGCGGGTGAACAGC
TGGTCAATAGATGAAAAGGCTTTATTACAGTCACTTTACAAGGTTTTAGTGTCGGTCTCT
GAAAACAGCCGTGTTATTCTCTACATCAGGGATGTTGACAGACATCTTCAACCTCCCAGA
GTTTATAAACTCTTTGATCGAATGCTGAAGAAGCTGTCGGGATCGGTGTTGGTTCTAGGC
TCCAGGATGTTTGAGCATGAAGATGATTGTGAGGAAGTAGATGAGAAACTCGGTCTTCTA
TTTCCTTACAGTATTGAAATCAGGCCCCCTGAAGATGAGACACATCTTACAGACTGGAAA
ACACAACTGGAAGAGGACATGAAGATGATTCAGTTTCAGGACAACAAGAATCACATTGCA
GAGGTGCTTGCAGCAAATGACCTCGAATGTGATGATCTAGGATCAATCTGTCGAGCTGAC
ACAGTGGTGCTGAGTAATTACATAGAGGAAATTGTTATCTCTGCTATATCATATCATTTG
ATGAACAGCAAGGATCCAGAATATCGAAATGGGAAGCTCCTCATATCATCCAACAGTTTG
TCCCATGGATTAAGTGTCTTCCAGGACGGAAAGAGTGGTTGCAGAGACTCCCTCAAAATG
GAGGCAAATGCTGAAACGTCCAAGGATACTGGGTTAAAGCCTGAAACAAAGTCTGAGAAC
CCAACATCTGAGAGTAAGGGCGAGGCTGAAAAATCAGTTCCTTCAGCAAAAAAGGATGGA
GAGATTAAGGCCCCGGAAGTTCTTCCTGACAATGAATTTGAGAAGCGGATAAGACCAGAG
GTTATACCTTCAAATGAAATTGGAGTGACATTTGCAGATATTGGTGCTCTAGATGAAACA
AAAGAATCACTTCAGGAGCTGGTCATGCTTCCTCTTAGAAGACCTGACCTCTTCAACGGT
GGACTGCTGAAGCCTTGCAGAGGTATACTACTCTTTGGTCCACCTGGCACTGGGAAAACG
ATGCTGGCCAAAGCAATAGCCAACGAAGCTGGAGCGAGCTTTATAAATGTCTCAATGTCA
ACCATTACTTCAAAATGGTTTGGGGAAGATGAAAAGAATGTCAGAGCTCTTTTCACACTT
GCAGCGAAGGTTTCTCCTACGATCATTTTTGTGGATGAGGTTGATAGCATGCTCGGGCAG
CGGACAAGAGTTGGAGAGCACGAGGCTATGCGAAAAATTAAGAATGAGTTTATGACTCAC
TGGGACGGTTTATTGACTAAACCAGGTGAGCGTATTCTTGTTCTTGCTGCAACCAACAGA
CCTTTCGACCTCGATGAAGCAATAATCAGGCGGTTTGAGCGCAGAATTATGGTCGGTTTA
CCTGCAGCTGAGAATAGAGAGAAGATTTTGAAAACTCTTCTAGCAAAGGAGAAGGTAGAA
GATCTTGATTTTAAAGAGCTCGCAGCCATGACCGAAGGATATAGTGGAAGTGATCTTAAG
AACTTGTGCACAACAGCAGCTTATCGGCCTGTCAGAGAGCTAATACAACAAGAGAGAAAG
AAAGATATGAAAAAGAAGCAGAGAGCTGACGAAGGGCAGAGTACAGAAGATCACTCAGAT
GAGAAAGAAGAAGCCACAGAAGAAAGAGTAATTGCTTTGAGGCCTCTAAACATGGAAGAC
ATGAAACAGGCAAAGAATCAGGTTGCTGCTAGCTTTGCTTCTGAGGGATCCGTAATGAGT
GAGCTGAAGCAGTGGAATGACCTTTATGGAGAAGGAGGTTCTAGAAAGAAGCAGCAGTTA
TCTTATTTCCTTTAG

Peptide Sequence

PEP ID

XP_016510116.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107827486 [Nicotiana tabacum]
Sequence

MEQKHVLLSALSVGVGVGLGLASGQAVNKWTGGNSAAEGITADQIEQELRRLFVDGKHTK
VSFADFPYFLSERTRVLLTSAAYVHLNHLDVSKHTRNLSPASRAILLSGPAELYQQTLAK
ALAHHFDAKLLLLDLTDFTLKMQSKYGIFKKESAFKRSTSESMLGRWSSLIGSFSILPAR
ENNGGTFSRQTTAFDAKSRNREGASNSLKHRRTASVSSDISSISSDSCSSNPAPTKRVNS
WSIDEKALLQSLYKVLVSVSENSRVILYIRDVDRHLQPPRVYKLFDRMLKKLSGSVLVLG
SRMFEHEDDCEEVDEKLGLLFPYSIEIRPPEDETHLTDWKTQLEEDMKMIQFQDNKNHIA
EVLAANDLECDDLGSICRADTVVLSNYIEEIVISAISYHLMNSKDPEYRNGKLLISSNSL
SHGLSVFQDGKSGCRDSLKMEANAETSKDTGLKPETKSENPTSESKGEAEKSVPSAKKDG
EIKAPEVLPDNEFEKRIRPEVIPSNEIGVTFADIGALDETKESLQELVMLPLRRPDLFNG
GLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTL
AAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNR
PFDLDEAIIRRFERRIMVGLPAAENREKILKTLLAKEKVEDLDFKELAAMTEGYSGSDLK
NLCTTAAYRPVRELIQQERKKDMKKKQRADEGQSTEDHSDEKEEATEERVIALRPLNMED
MKQAKNQVAASFASEGSVMSELKQWNDLYGEGGSRKKQQLSYFL

Transcript Sequence

Gene sequence data has not been registered.